
Additional files
Additional file 1: List of primers and UPL probes used for
reverse-transcriptase quantitative PCR (RT-qPCR) validations.
Additional file 2: Video demonstrating three-dimensional (3D)
image of a BV2 microglia with the 3D collagen gel.
Additional file 3: Reverse-transcriptase quantitative PCR (RT-qPCR)
analyses of TNF, MCP-1, IL-b, IL-12b and IL-6 mRNA.
Abbreviations
CNS: Central nervous system; DAPI: 4',6-diamidino-2-phenylindole,
dihydrochloride; ECM: Extracellular matrix; FITC: Fluorescein isothiocyanate;
iNOS: inducible nitric oxide synthase; LDH: Lactate dehydrogenase;
LPS: Lipopolysaccha ride; MFI: Median fluorescence intensity; nNOS: neuronal
nitric oxide synthase; NO: Nitric oxide; OD: Optical density;
PFA: Paraformaldehyde; PI: Propidium iodide; 3D: three-dimensional.
Competing interests
The authors declare that they have no competing interests.
Authors’ contributions
RHTY performed the cell cultures, LDH assay, Griess assay and cytokine bead
array. TCK established the 3D collagen cultures, performed the confocal
microscopy, immunophenotyping and viability staining. AY performed the
scanning electron microscopy. LHC performed the RT-qPCR experiments. SV
and JBP conceptualised the study. SV wrote the manuscript. All authors
analysed the data and read and approved the final manuscript.
Acknowledgements
The authors would like to thank Hi-Tech Instruments Sdn. Bhd. and the Brain
Research Institute Monash Unive rsity Sunway for use of their confocal
microscope, staff of the Electron Micro scopy Unit, Universiti Putra Malaysia
for assistance with the electron microscopy, and Dr. Michael Ling King Hwa
for his expert advice on RT-qPCR. This study was funded by the Research
University Grant Scheme (UPM) [04-02-12-1796RU] and the Exploratory Research
Grant Scheme (Ministry of Higher Education Malaysia) [ERGS/1/2012/5527106].
Randy Haw Tatt Yhew, Tong Chih Kong an d Lee Ha n Chung are supp orted
by MyBr ain15 postgraduate scholarship programmes by the Ministry of
Education (MOE), Malaysia.
Author details
1
Neuroinflammation Group, Immunology Laboratory, Department of
Pathology, Faculty of Medicine & Health Sciences, Universiti Putra Malaysia,
43400 Serdang, Selangor, Malaysia.
2
Genetic & Regenerative Medicine
Research Centre (GRMRC) & Department of Obstetrics & Gynaecology,
Faculty of Medicine & Health Sciences, Universiti Putra Malaysia, 43400 UPM
Serdang, Selangor, Malaysia.
3
Department of Biomaterials & Tissue
Engineering, University College London, UCL Eastman Dental Institute,
256 Gray’s Inn Road, London WC1X 8LD, UK.
Received: 16 December 2013 Accepted: 16 July 2014
Published: 30 July 2014
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